Retrieval-Augmented Generation (RAG) 2.0: Best Practices for Hybrid Indexing and Context Optimization
Most developers I talk to are still using basic vector search for RAG. They throw documents into a vector database, embed queries, and hope for the best. But here’s the thing - that approach has problems. You get hallucinations, slow responses, and context that’s either too much or too little.
RAG is evolving fast. The new approach combines different search methods, compresses context intelligently, and grounds responses in real data. This isn’t just about better search - it’s about building AI systems that actually work in production.
What’s Wrong with Basic RAG
Let me show you what I mean. A typical RAG setup looks like this:
- You embed your documents into vectors
- You embed the user’s question
- You find the most similar vectors
- You pass those chunks to the LLM
Sounds simple, right? But this creates several issues:
Hallucinations happen because the LLM doesn’t know when it’s making things up. It sees some context and assumes it’s complete.
Latency is high because you’re sending massive context windows to the LLM. More tokens mean slower responses and higher costs.
Context flooding occurs when you retrieve too much irrelevant information. The LLM gets confused by noise.
Poor recall happens because vector search alone misses important information that doesn’t match semantically.
I’ve seen teams spend months fine-tuning embeddings and still get inconsistent results. The problem isn’t the embeddings - it’s the approach.
The RAG 2.0 Evolution
RAG 2.0 fixes these problems by combining multiple retrieval methods and optimizing context. Here’s how it works:
Sparse vs Dense Retrieval
First, let’s understand the two main search approaches:
Sparse retrieval (like BM25) looks for exact keyword matches. It’s fast and precise but misses semantic meaning.
Dense retrieval (vector embeddings) finds semantically similar content but can miss important keywords.
The magic happens when you combine both. Sparse retrieval catches the keywords, dense retrieval finds the meaning.
Hybrid Retrieval in Practice
Here’s a simple example of how hybrid retrieval works:
import faiss
from rank_bm25 import BM25Okapi
import numpy as np
class HybridRetriever:
def __init__(self, documents, embeddings):
self.documents = documents
self.embeddings = np.array(embeddings)
# Build BM25 index
tokenized_docs = [doc.split() for doc in documents]
self.bm25 = BM25Okapi(tokenized_docs)
# Build FAISS index
self.faiss_index = faiss.IndexFlatIP(embeddings.shape[1])
self.faiss_index.add(embeddings.astype('float32'))
def search(self, query, k=10, alpha=0.5):
# Sparse search
tokenized_query = query.split()
bm25_scores = self.bm25.get_scores(tokenized_query)
# Dense search
query_embedding = self.embed_query(query)
dense_scores, dense_indices = self.faiss_index.search(
query_embedding.reshape(1, -1).astype('float32'), k
)
# Combine scores
combined_scores = {}
for i, score in enumerate(bm25_scores):
combined_scores[i] = alpha * score + (1 - alpha) * 0
for i, (idx, score) in enumerate(zip(dense_indices[0], dense_scores[0])):
if idx in combined_scores:
combined_scores[idx] += (1 - alpha) * score
else:
combined_scores[idx] = (1 - alpha) * score
# Return top results
sorted_results = sorted(combined_scores.items(),
key=lambda x: x[1], reverse=True)
return [(idx, score) for idx, score in sorted_results[:k]]
This approach gives you the best of both worlds. BM25 catches exact matches, embeddings find semantic similarity.
Context Re-ranking and Summarization
But retrieval is just the first step. You also need to optimize the context before sending it to the LLM.
Re-ranking improves the order of retrieved documents. A cross-encoder model can score document-query pairs more accurately than the initial retrieval:
from sentence_transformers import CrossEncoder
class ContextReranker:
def __init__(self):
self.cross_encoder = CrossEncoder('cross-encoder/ms-marco-MiniLM-L-6-v2')
def rerank(self, query, documents, top_k=5):
pairs = [(query, doc) for doc in documents]
scores = self.cross_encoder.predict(pairs)
# Sort by scores
ranked_docs = sorted(zip(documents, scores),
key=lambda x: x[1], reverse=True)
return [doc for doc, score in ranked_docs[:top_k]]
Context compression reduces the amount of text you send to the LLM. You can use extractive summarization to pull out the most relevant sentences:
from transformers import pipeline
class ContextCompressor:
def __init__(self):
self.summarizer = pipeline("summarization",
model="facebook/bart-large-cnn")
def compress(self, documents, max_length=500):
# Combine documents
combined_text = " ".join(documents)
# Summarize if too long
if len(combined_text.split()) > max_length:
summary = self.summarizer(combined_text,
max_length=max_length//4,
min_length=50,
do_sample=False)
return summary[0]['summary_text']
return combined_text
Design Patterns for Modern RAG
Index Sharding by Domain
Don’t put everything in one index. Split your data by domain:
class DomainShardedRAG:
def __init__(self):
self.indices = {
'documents': HybridRetriever(docs, doc_embeddings),
'faqs': HybridRetriever(faqs, faq_embeddings),
'transactions': HybridRetriever(transactions, tx_embeddings)
}
def search(self, query, domain=None):
if domain:
return self.indices[domain].search(query)
# Search all domains and combine
all_results = []
for domain, retriever in self.indices.items():
results = retriever.search(query, k=5)
all_results.extend([(domain, idx, score) for idx, score in results])
# Sort by score and return top results
return sorted(all_results, key=lambda x: x[2], reverse=True)[:10]
Metadata Filters and Time-based Re-ranking
Use metadata to filter and re-rank results:
class MetadataAwareRAG:
def __init__(self, documents, embeddings, metadata):
self.retriever = HybridRetriever(documents, embeddings)
self.metadata = metadata
def search(self, query, filters=None, time_weight=0.1):
# Get initial results
results = self.retriever.search(query)
# Apply metadata filters
if filters:
filtered_results = []
for idx, score in results:
doc_metadata = self.metadata[idx]
if self.matches_filters(doc_metadata, filters):
filtered_results.append((idx, score))
results = filtered_results
# Apply time-based re-ranking
if time_weight > 0:
results = self.apply_time_reranking(results, time_weight)
return results
def apply_time_reranking(self, results, time_weight):
current_time = time.time()
reranked = []
for idx, score in results:
doc_time = self.metadata[idx]['timestamp']
time_score = 1.0 / (1.0 + (current_time - doc_time) / (365 * 24 * 3600)) # Decay over years
final_score = score + time_weight * time_score
reranked.append((idx, final_score))
return sorted(reranked, key=lambda x: x[1], reverse=True)
Best Practices for Production RAG
When to Use Hybrid Retrieval
Use hybrid retrieval when:
- You have diverse content types (technical docs, FAQs, conversations)
- Users ask both specific and general questions
- You need high recall for important information
- You’re dealing with domain-specific terminology
Stick with single retrieval when:
- Your content is very homogeneous
- Latency is critical and you can’t afford the extra computation
- You have limited resources for maintaining multiple indices
Avoiding Context Flooding
Context flooding happens when you send too much irrelevant information to the LLM. Here’s how to prevent it:
class ContextOptimizer:
def __init__(self, max_tokens=2000):
self.max_tokens = max_tokens
self.tokenizer = AutoTokenizer.from_pretrained("gpt-3.5-turbo")
def optimize_context(self, query, documents):
# Start with the most relevant document
context = documents[0]
token_count = len(self.tokenizer.encode(context))
# Add more documents until we hit the limit
for doc in documents[1:]:
doc_tokens = len(self.tokenizer.encode(doc))
if token_count + doc_tokens > self.max_tokens:
break
context += "\n\n" + doc
token_count += doc_tokens
return context
Scaling Retrieval in Real-time
For production systems, you need to handle high query volumes:
import asyncio
from concurrent.futures import ThreadPoolExecutor
class ScalableRAG:
def __init__(self, num_workers=4):
self.executor = ThreadPoolExecutor(max_workers=num_workers)
self.retriever = HybridRetriever(documents, embeddings)
self.reranker = ContextReranker()
self.compressor = ContextCompressor()
async def search_async(self, query):
# Run retrieval in thread pool
loop = asyncio.get_event_loop()
results = await loop.run_in_executor(
self.executor,
self.retriever.search,
query
)
# Get document texts
documents = [self.retriever.documents[idx] for idx, _ in results]
# Rerank in parallel
reranked = await loop.run_in_executor(
self.executor,
self.reranker.rerank,
query,
documents
)
# Compress context
compressed = await loop.run_in_executor(
self.executor,
self.compressor.compress,
reranked
)
return compressed
Code Samples: Complete Hybrid RAG Pipeline
Here’s a complete implementation that brings everything together:
import asyncio
import time
from typing import List, Dict, Any
import numpy as np
import faiss
from rank_bm25 import BM25Okapi
from sentence_transformers import SentenceTransformer, CrossEncoder
from transformers import pipeline
class RAG2Pipeline:
def __init__(self, documents: List[str], metadata: List[Dict] = None):
self.documents = documents
self.metadata = metadata or [{}] * len(documents)
# Initialize models
self.embedder = SentenceTransformer('all-MiniLM-L6-v2')
self.cross_encoder = CrossEncoder('cross-encoder/ms-marco-MiniLM-L-6-v2')
self.summarizer = pipeline("summarization", model="facebook/bart-large-cnn")
# Build indices
self._build_indices()
def _build_indices(self):
# Generate embeddings
embeddings = self.embedder.encode(self.documents)
self.embeddings = embeddings.astype('float32')
# Build BM25 index
tokenized_docs = [doc.split() for doc in self.documents]
self.bm25 = BM25Okapi(tokenized_docs)
# Build FAISS index
self.faiss_index = faiss.IndexFlatIP(embeddings.shape[1])
self.faiss_index.add(self.embeddings)
def hybrid_search(self, query: str, k: int = 20, alpha: float = 0.5) -> List[tuple]:
# Sparse search
tokenized_query = query.split()
bm25_scores = self.bm25.get_scores(tokenized_query)
# Dense search
query_embedding = self.embedder.encode([query]).astype('float32')
dense_scores, dense_indices = self.faiss_index.search(query_embedding, k)
# Combine scores
combined_scores = {}
for i, score in enumerate(bm25_scores):
combined_scores[i] = alpha * score
for idx, score in zip(dense_indices[0], dense_scores[0]):
if idx in combined_scores:
combined_scores[idx] += (1 - alpha) * score
else:
combined_scores[idx] = (1 - alpha) * score
# Return sorted results
return sorted(combined_scores.items(), key=lambda x: x[1], reverse=True)
def rerank_documents(self, query: str, doc_indices: List[int], top_k: int = 5) -> List[int]:
documents = [self.documents[idx] for idx in doc_indices]
pairs = [(query, doc) for doc in documents]
scores = self.cross_encoder.predict(pairs)
# Sort by scores
ranked_indices = sorted(zip(doc_indices, scores),
key=lambda x: x[1], reverse=True)
return [idx for idx, score in ranked_indices[:top_k]]
def compress_context(self, doc_indices: List[int], max_tokens: int = 1000) -> str:
documents = [self.documents[idx] for idx in doc_indices]
combined_text = " ".join(documents)
# Simple token counting (you might want to use proper tokenizer)
word_count = len(combined_text.split())
if word_count > max_tokens:
# Summarize if too long
summary = self.summarizer(combined_text,
max_length=max_tokens//4,
min_length=50,
do_sample=False)
return summary[0]['summary_text']
return combined_text
def query(self, question: str, max_docs: int = 5, max_tokens: int = 1000) -> Dict[str, Any]:
start_time = time.time()
# Step 1: Hybrid retrieval
search_results = self.hybrid_search(question, k=20)
doc_indices = [idx for idx, score in search_results]
# Step 2: Re-ranking
reranked_indices = self.rerank_documents(question, doc_indices, top_k=max_docs)
# Step 3: Context compression
context = self.compress_context(reranked_indices, max_tokens)
# Step 4: Prepare response
response = {
'context': context,
'source_documents': [self.documents[idx] for idx in reranked_indices],
'metadata': [self.metadata[idx] for idx in reranked_indices],
'processing_time': time.time() - start_time,
'num_documents_retrieved': len(reranked_indices)
}
return response
# Usage example
if __name__ == "__main__":
# Sample documents
documents = [
"Python is a programming language that's easy to learn and powerful.",
"Machine learning uses algorithms to find patterns in data.",
"RAG combines retrieval and generation for better AI responses.",
"Vector databases store embeddings for fast similarity search.",
"Hybrid retrieval combines multiple search methods for better results."
]
# Initialize pipeline
rag_pipeline = RAG2Pipeline(documents)
# Query the system
result = rag_pipeline.query("What is RAG and how does it work?")
print("Context:", result['context'])
print("Sources:", result['source_documents'])
print("Processing time:", result['processing_time'])
Case Study: OmniOrder Seller Bot
Let me show you how this works in practice with a real example. OmniOrder is an e-commerce platform that helps sellers manage their orders. They built a bot that answers seller questions about orders, inventory, and policies.
The Problem
Sellers were asking questions like:
- “Why was my order #12345 delayed?”
- “What’s my inventory status for product ABC?”
- “How do I handle returns for international orders?”
The basic RAG system was giving inconsistent answers. Sometimes it would hallucinate order numbers that didn’t exist. Other times it would miss important policy details.
The Solution
They implemented a hybrid RAG system with domain-specific indices:
class OmniOrderRAG:
def __init__(self):
# Separate indices for different data types
self.indices = {
'orders': HybridRetriever(order_docs, order_embeddings),
'inventory': HybridRetriever(inventory_docs, inventory_embeddings),
'policies': HybridRetriever(policy_docs, policy_embeddings),
'faqs': HybridRetriever(faq_docs, faq_embeddings)
}
self.reranker = ContextReranker()
self.compressor = ContextCompressor()
def answer_question(self, question: str, seller_id: str) -> str:
# Determine which indices to search
relevant_indices = self._determine_relevant_indices(question)
# Search each relevant index
all_results = []
for index_name in relevant_indices:
results = self.indices[index_name].search(question, k=10)
all_results.extend([(index_name, idx, score) for idx, score in results])
# Filter by seller if applicable
filtered_results = self._filter_by_seller(all_results, seller_id)
# Rerank results
doc_indices = [idx for _, idx, _ in filtered_results]
reranked_indices = self.reranker.rerank(question, doc_indices, top_k=5)
# Compress context
context = self.compressor.compress(reranked_indices)
# Generate answer with LLM
answer = self._generate_answer(question, context)
return answer
def _determine_relevant_indices(self, question: str) -> List[str]:
# Simple keyword-based routing
question_lower = question.lower()
if any(word in question_lower for word in ['order', 'ship', 'deliver']):
return ['orders', 'faqs']
elif any(word in question_lower for word in ['inventory', 'stock', 'product']):
return ['inventory', 'faqs']
elif any(word in question_lower for word in ['return', 'refund', 'policy']):
return ['policies', 'faqs']
else:
return ['faqs', 'orders', 'policies']
The Results
After implementing this system:
- Accuracy improved by 40% - fewer hallucinations and more relevant answers
- Response time decreased by 30% - better context compression meant faster LLM calls
- Seller satisfaction increased - they got more helpful, accurate responses
The key was combining different search methods and optimizing the context before sending it to the LLM.
Conclusion
RAG 2.0 isn’t just about better search - it’s about building AI systems that work reliably in production. The techniques I’ve shown you here address the real problems developers face:
- Hybrid retrieval gives you better recall and precision
- Context optimization reduces latency and costs
- Domain sharding improves relevance and performance
- Re-ranking ensures the most important information comes first
But this is just the beginning. The future of RAG includes:
- Structured knowledge integration - combining vector search with knowledge graphs
- Agent-based systems - RAG that can take actions, not just answer questions
- Live API integration - pulling real-time data into responses
- Multi-modal retrieval - searching across text, images, and other data types
The companies that master these techniques will build AI systems that actually help users instead of just impressing them with technology. Start with hybrid retrieval and context optimization. These two changes alone will make a huge difference in your RAG system’s performance.
The goal isn’t to use every technique at once. Pick the ones that solve your specific problems. Start simple, measure the results, and iterate. That’s how you build RAG systems that actually work.
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